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strain

Archaea; Crenarchaeota
Aeropyrum pernix K1	Caldivirga maquilingensis IC-167
Desulfurococcus kamchatkensis 1221n	Hyperthermus butylicus DSM 5456
Ignicoccus hospitalis KIN4/I	Metallosphaera sedula DSM 5348
Nitrosopumilus maritimus SCM1	Pyrobaculum aerophilum str. IM2
Pyrobaculum arsenaticum DSM 13514	Pyrobaculum calidifontis JCM 11548
Pyrobaculum islandicum DSM 4184	Staphylothermus marinus F1
Sulfolobus acidocaldarius DSM 639	Sulfolobus islandicus L.D.8.5
Sulfolobus islandicus L.S.2.15	Sulfolobus islandicus M.14.25
Sulfolobus islandicus M.16.27	Sulfolobus islandicus M.16.4
Sulfolobus islandicus Y.G.57.14	Sulfolobus islandicus Y.N.15.51
Sulfolobus solfataricus 98/2	Sulfolobus solfataricus P2
Sulfolobus tokodaii str. 7	Thermofilum pendens Hrk 5
Thermoproteus neutrophilus V24Sta
Archaea; Euryarchaeota
Aciduliprofundum boonei T469	Archaeoglobus fulgidus DSM 4304
Archaeoglobus profundus DSM 5631	Candidatus Methanoregula boonei 6A8
Candidatus Methanosphaerula palustris E1-9c	Ferroglobus placidus DSM 10642
Haloarcula marismortui ATCC 43049	Halobacterium salinarum R1
Halobacterium sp. NRC-1	Halomicrobium mukohataei DSM 12286
Haloquadratum walsbyi DSM 16790	Halorhabdus utahensis DSM 12940
Halorubrum lacusprofundi ATCC 49239	Haloterrigena turkmenica DSM 5511
Methanobrevibacter ruminantium M1	Methanobrevibacter smithii ATCC 35061
Methanocaldococcus fervens AG86	Methanocaldococcus jannaschii DSM 2661
Methanocaldococcus sp. FS406-22	Methanocaldococcus vulcanius M7
Methanocella paludicola SANAE	Methanococcoides burtonii DSM 6242
Methanococcus aeolicus Nankai-3	Methanococcus maripaludis C5
Methanococcus maripaludis C6	Methanococcus maripaludis C7
Methanococcus maripaludis S2	Methanococcus vannielii SB
Methanocorpusculum labreanum Z	Methanoculleus marisnigri JR1
Methanopyrus kandleri AV19	Methanosaeta thermophila PT
Methanosarcina acetivorans C2A	Methanosarcina barkeri str. Fusaro
Methanosarcina mazei Go1	Methanosphaera stadtmanae DSM 3091
Methanospirillum hungatei JF-1	Methanothermobacter thermautotrophicus str. Delta H
Natrialba magadii ATCC 43099	Natronomonas pharaonis DSM 2160
Picrophilus torridus DSM 9790	Pyrococcus abyssi GE5
Pyrococcus furiosus DSM 3638	Pyrococcus horikoshii OT3
Thermococcus gammatolerans EJ3	Thermococcus kodakarensis KOD1
Thermococcus onnurineus NA1	Thermococcus sibiricus MM 739
Thermoplasma acidophilum DSM 1728	Thermoplasma volcanium GSS1
uncultured methanogenic archaeon RC-I
Archaea; Korarchaeota
Candidatus Korarchaeum cryptofilum OPF8
Archaea; Nanoarchaeota
Nanoarchaeum equitans Kin4-M
Bacteria; Acidobacteria
Acidobacterium capsulatum ATCC 51196	Candidatus Koribacter versatilis Ellin345
Solibacter usitatus Ellin6076
Bacteria; Actinobacteria
Acidimicrobium ferrooxidans DSM 10331	Acidothermus cellulolyticus 11B
Actinosynnema mirum DSM 43827	Arthrobacter aurescens TC1
Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24
Atopobium parvulum DSM 20469	Beutenbergia cavernae DSM 12333
Bifidobacterium adolescentis ATCC 15703	Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium animalis subsp. lactis Bb12	Bifidobacterium animalis subsp. lactis Bl-04
Bifidobacterium animalis subsp. lactis DSM 10140	Bifidobacterium dentium Bd1
Bifidobacterium longum DJO10A	Bifidobacterium longum NCC2705
Bifidobacterium longum subsp. infantis ATCC 15697	Brachybacterium faecium DSM 4810
Catenulispora acidiphila DSM 44928	Clavibacter michiganensis subsp. michiganensis NCPPB 382
Clavibacter michiganensis subsp. sepedonicus	Conexibacter woesei DSM 14684
Corynebacterium aurimucosum ATCC 700975	Corynebacterium diphtheriae NCTC 13129
Corynebacterium efficiens YS-314	Corynebacterium glutamicum ATCC 13032 (Kyowa)
Corynebacterium glutamicum ATCC 13032 (U.Bielefeld)	Corynebacterium glutamicum R
Corynebacterium jeikeium K411	Corynebacterium kroppenstedtii DSM 44385
Corynebacterium urealyticum DSM 7109	Cryptobacterium curtum DSM 15641
Eggerthella lenta DSM 2243	Frankia alni ACN14a
Frankia sp. CcI3	Frankia sp. EAN1pec
Gardnerella vaginalis 409-05	Geodermatophilus obscurus DSM 43160
Gordonia bronchialis DSM 43247	Jonesia denitrificans DSM 20603
Kineococcus radiotolerans SRS30216	Kocuria rhizophila DC2201
Kribbella flavida DSM 17836	Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07	Micrococcus luteus NCTC 2665
Mycobacterium abscessus	Mycobacterium avium 104
Mycobacterium avium subsp. paratuberculosis K-10	Mycobacterium bovis AF2122/97
Mycobacterium bovis BCG Moreau RDJ	Mycobacterium bovis BCG str. Pasteur 1173P2
Mycobacterium bovis BCG str. Tokyo 172	Mycobacterium gilvum PYR-GCK
Mycobacterium leprae Br4923	Mycobacterium leprae TN
Mycobacterium marinum M	Mycobacterium smegmatis str. MC2 155
Mycobacterium sp. JLS	Mycobacterium sp. KMS
Mycobacterium sp. MCS	Mycobacterium tuberculosis CDC1551
Mycobacterium tuberculosis F11	Mycobacterium tuberculosis H37Ra
Mycobacterium tuberculosis H37Rv	Mycobacterium tuberculosis KZN 1435
Mycobacterium ulcerans Agy99	Mycobacterium vanbaalenii PYR-1
Nakamurella multipartita DSM 44233	Nocardia farcinica IFM 10152
Nocardioides sp. JS614	Propionibacterium acnes KPA171202
Renibacterium salmoninarum ATCC 33209	Rhodococcus erythropolis PR4
Rhodococcus jostii RHA1	Rhodococcus opacus B4
Rothia mucilaginosa DY-18	Rubrobacter xylanophilus DSM 9941
Saccharomonospora viridis DSM 43017	Saccharopolyspora erythraea NRRL 2338
Salinispora arenicola CNS-205	Salinispora tropica CNB-440
Sanguibacter keddieii DSM 10542	Slackia heliotrinireducens DSM 20476
Stackebrandtia nassauensis DSM 44728	Streptomyces avermitilis MA-4680
Streptomyces coelicolor A3(2)	Streptomyces griseus subsp. griseus NBRC 13350
Streptomyces scabiei 87.22	Streptosporangium roseum DSM 43021
Thermobifida fusca YX	Thermomonospora curvata DSM 43183
Tropheryma whipplei TW08/27	Tropheryma whipplei str. Twist
Xylanimonas cellulosilytica DSM 15894
Bacteria; Aquificae
Aquifex aeolicus VF5	Hydrogenobacter thermophilus TK-6
Hydrogenobaculum sp. Y04AAS1	Persephonella marina EX-H1
Sulfurihydrogenibium azorense Az-Fu1	Sulfurihydrogenibium sp. YO3AOP1
Thermocrinis albus DSM 14484
Bacteria; Bacteroidetes
Bacteroides fragilis NCTC 9343	Bacteroides fragilis YCH46
Bacteroides thetaiotaomicron VPI-5482	Bacteroides vulgatus ATCC 8482
Blattabacterium sp. (Periplaneta americana) str. BPLAN	Candidatus Amoebophilus asiaticus 5a2
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	Candidatus Sulcia muelleri GWSS
Candidatus Sulcia muelleri SMDSEM	Capnocytophaga ochracea DSM 7271
Chitinophaga pinensis DSM 2588	Cytophaga hutchinsonii ATCC 33406
Dyadobacter fermentans DSM 18053	Flavobacteriaceae bacterium 3519-10
Flavobacterium johnsoniae UW101	Flavobacterium psychrophilum JIP02/86
Gramella forsetii KT0803	Parabacteroides distasonis ATCC 8503
Pedobacter heparinus DSM 2366	Porphyromonas gingivalis ATCC 33277
Porphyromonas gingivalis W83	Rhodothermus marinus DSM 4252
Robiginitalea biformata HTCC2501	Salinibacter ruber DSM 13855
Spirosoma linguale DSM 74
Bacteria; Chlamydiae
Candidatus Protochlamydia amoebophila UWE25	Chlamydia muridarum Nigg
Chlamydia trachomatis 434/Bu	Chlamydia trachomatis A/HAR-13
Chlamydia trachomatis B/Jali20/OT	Chlamydia trachomatis B/TZ1A828/OT
Chlamydia trachomatis D/UW-3/CX	Chlamydia trachomatis L2b/UCH-1/proctitis
Chlamydia trachomatis Sweden2	Chlamydophila abortus S26/3
Chlamydophila caviae GPIC	Chlamydophila felis Fe/C-56
Chlamydophila pneumoniae AR39	Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae J138	Chlamydophila pneumoniae LPCoLN
Chlamydophila pneumoniae TW-183
Bacteria; Chlorobi
Chlorobaculum parvum NCIB 8327	Chlorobium chlorochromatii CaD3
Chlorobium limicola DSM 245	Chlorobium luteolum DSM 273
Chlorobium phaeobacteroides BS1	Chlorobium phaeobacteroides DSM 266
Chlorobium phaeovibrioides DSM 265	Chlorobium tepidum TLS
Chloroherpeton thalassium ATCC 35110	Pelodictyon phaeoclathratiforme BU-1
Prosthecochloris aestuarii DSM 271
Bacteria; Chloroflexi
Chloroflexus aggregans DSM 9485	Chloroflexus aurantiacus J-10-fl
Chloroflexus sp. Y-400-fl	Dehalococcoides ethenogenes 195
Dehalococcoides sp. BAV1	Dehalococcoides sp. CBDB1
Dehalococcoides sp. GT	Dehalococcoides sp. VS
Herpetosiphon aurantiacus ATCC 23779	Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1	Sphaerobacter thermophilus DSM 20745
Thermomicrobium roseum DSM 5159
Bacteria; Cyanobacteria
Acaryochloris marina MBIC11017	Anabaena variabilis ATCC 29413
Cyanothece sp. ATCC 51142	Cyanothece sp. PCC 7424
Cyanothece sp. PCC 7425	Cyanothece sp. PCC 8801
Cyanothece sp. PCC 8802	Gloeobacter violaceus PCC 7421
Microcystis aeruginosa NIES-843	Nostoc punctiforme PCC 73102
Nostoc sp. PCC 7120	Prochlorococcus marinus str. AS9601
Prochlorococcus marinus str. MIT 9211	Prochlorococcus marinus str. MIT 9215
Prochlorococcus marinus str. MIT 9301	Prochlorococcus marinus str. MIT 9303
Prochlorococcus marinus str. MIT 9312	Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9515	Prochlorococcus marinus str. NATL1A
Prochlorococcus marinus str. NATL2A	Prochlorococcus marinus subsp. marinus str. CCMP1375
Prochlorococcus marinus subsp. pastoris str. CCMP1986	Synechococcus elongatus PCC 6301
Synechococcus elongatus PCC 7942	Synechococcus sp. CC9311
Synechococcus sp. CC9605	Synechococcus sp. CC9902
Synechococcus sp. JA-2-3B'a(2-13)	Synechococcus sp. JA-3-3Ab
Synechococcus sp. PCC 7002	Synechococcus sp. RCC307
Synechococcus sp. WH 7803	Synechococcus sp. WH 8102
Synechocystis sp. PCC 6803	Thermosynechococcus elongatus BP-1
Trichodesmium erythraeum IMS101	cyanobacterium UCYN-A
Bacteria; Deferribacteres
Denitrovibrio acetiphilus DSM 12809
Bacteria; Deinococcus-Thermus
Deinococcus deserti VCD115	Deinococcus geothermalis DSM 11300
Deinococcus radiodurans R1	Thermus thermophilus HB27
Thermus thermophilus HB8
Bacteria; Dictyoglomi
Dictyoglomus thermophilum H-6-12	Dictyoglomus turgidum DSM 6724
Bacteria; Elusimicrobia
Elusimicrobium minutum Pei191
Bacteria; Fibrobacteres
Fibrobacter succinogenes subsp. succinogenes S85
Bacteria; Firmicutes
Acholeplasma laidlawii PG-8A	Acidaminococcus fermentans DSM 20731
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	Alkaliphilus metalliredigens QYMF
Alkaliphilus oremlandii OhILAs	Ammonifex degensii KC4
Anaerocellum thermophilum DSM 6725	Anaerococcus prevotii DSM 20548
Anoxybacillus flavithermus WK1	Aster yellows witches'-broom phytoplasma AYWB
Bacillus amyloliquefaciens FZB42	Bacillus anthracis str. 'Ames Ancestor'
Bacillus anthracis str. A0248	Bacillus anthracis str. Ames
Bacillus anthracis str. CDC 684	Bacillus anthracis str. Sterne
Bacillus cereus 03BB102	Bacillus cereus AH187
Bacillus cereus AH820	Bacillus cereus ATCC 10987
Bacillus cereus ATCC 14579	Bacillus cereus B4264
Bacillus cereus E33L	Bacillus cereus G9842
Bacillus cereus Q1	Bacillus cereus subsp. cytotoxis NVH 391-98
Bacillus clausii KSM-K16	Bacillus halodurans C-125
Bacillus licheniformis ATCC 14580 (Goettingen)	Bacillus licheniformis ATCC 14580 (Novozymes)
Bacillus pseudofirmus OF4	Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168	Bacillus thuringiensis serovar konkukian str. 97-27
Bacillus thuringiensis str. Al Hakam	Bacillus weihenstephanensis KBAB4
Brevibacillus brevis NBRC 100599	Caldicellulosiruptor saccharolyticus DSM 8903
Candidatus Desulforudis audaxviator MP104C	Candidatus Phytoplasma australiense
Carboxydothermus hydrogenoformans Z-2901	Clostridiales genomosp. BVAB3 str. UPII9-5
Clostridium acetobutylicum ATCC 824	Clostridium beijerinckii NCIMB 8052
Clostridium botulinum A str. ATCC 19397	Clostridium botulinum A str. ATCC 3502
Clostridium botulinum A str. Hall	Clostridium botulinum A2 str. Kyoto
Clostridium botulinum A3 str. Loch Maree	Clostridium botulinum B str. Eklund 17B
Clostridium botulinum B1 str. Okra	Clostridium botulinum Ba4 str. 657
Clostridium botulinum E3 str. Alaska E43	Clostridium botulinum F str. Langeland
Clostridium cellulolyticum H10	Clostridium difficile 630
Clostridium difficile CD196	Clostridium difficile R20291
Clostridium kluyveri DSM 555	Clostridium kluyveri NBRC 12016
Clostridium novyi NT	Clostridium perfringens ATCC 13124
Clostridium perfringens SM101	Clostridium perfringens str. 13
Clostridium phytofermentans ISDg	Clostridium tetani E88
Clostridium thermocellum ATCC 27405	Coprothermobacter proteolyticus DSM 5265
Desulfitobacterium hafniense DCB-2	Desulfitobacterium hafniense Y51
Desulfotomaculum acetoxidans DSM 771	Desulfotomaculum reducens MI-1
Enterococcus faecalis V583	Eubacterium eligens ATCC 27750
Eubacterium rectale ATCC 33656	Exiguobacterium sibiricum 255-15
Exiguobacterium sp. AT1b	Finegoldia magna ATCC 29328
Geobacillus kaustophilus HTA426	Geobacillus sp. WCH70
Geobacillus sp. Y412MC10	Geobacillus sp. Y412MC61
Geobacillus thermodenitrificans NG80-2	Halothermothrix orenii H 168
Heliobacterium modesticaldum Ice1	Lactobacillus acidophilus NCFM
Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334
Lactobacillus casei BL23	Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956
Lactobacillus gasseri ATCC 33323	Lactobacillus helveticus DPC 4571
Lactobacillus johnsonii FI9785	Lactobacillus johnsonii NCC 533
Lactobacillus plantarum JDM1	Lactobacillus plantarum WCFS1
Lactobacillus reuteri DSM 20016	Lactobacillus reuteri JCM 1112
Lactobacillus rhamnosus GG	Lactobacillus rhamnosus GG(U.Tokyo)
Lactobacillus rhamnosus Lc 705	Lactobacillus sakei subsp. sakei 23K
Lactobacillus salivarius UCC118	Lactococcus lactis subsp. cremoris MG1363
Lactococcus lactis subsp. cremoris SK11	Lactococcus lactis subsp. lactis Il1403
Lactococcus lactis subsp. lactis KF147	Leuconostoc citreum KM20
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Listeria innocua Clip11262
Listeria monocytogenes 08-5578	Listeria monocytogenes 08-5923
Listeria monocytogenes Clip81459	Listeria monocytogenes EGD-e
Listeria monocytogenes HCC23	Listeria monocytogenes str. 4b F2365
Listeria seeligeri serovar 1/2b str. SLCC3954	Listeria welshimeri serovar 6b str. SLCC5334
Lysinibacillus sphaericus C3-41	Macrococcus caseolyticus JCSC5402
Mesoplasma florum L1	Moorella thermoacetica ATCC 39073
Mycoplasma capricolum subsp. capricolum ATCC 27343	Mycoplasma hyopneumoniae 232
Mycoplasma hyopneumoniae 7448	Mycoplasma hyopneumoniae J
Mycoplasma mobile 163K	Mycoplasma pulmonis UAB CTIP
Mycoplasma synoviae 53	Natranaerobius thermophilus JW/NM-WN-LF
Oceanobacillus iheyensis HTE831	Oenococcus oeni PSU-1
Paenibacillus sp. JDR-2	Pediococcus pentosaceus ATCC 25745
Pelotomaculum thermopropionicum SI	Staphylococcus aureus 04-02981
Staphylococcus aureus RF122	Staphylococcus aureus subsp. aureus COL
Staphylococcus aureus subsp. aureus JH1	Staphylococcus aureus subsp. aureus JH9
Staphylococcus aureus subsp. aureus MRSA252	Staphylococcus aureus subsp. aureus MSSA476
Staphylococcus aureus subsp. aureus MW2	Staphylococcus aureus subsp. aureus Mu3
Staphylococcus aureus subsp. aureus Mu50	Staphylococcus aureus subsp. aureus N315
Staphylococcus aureus subsp. aureus NCTC 8325	Staphylococcus aureus subsp. aureus ST398
Staphylococcus aureus subsp. aureus TW20	Staphylococcus aureus subsp. aureus USA300_FPR3757
Staphylococcus aureus subsp. aureus USA300_TCH1516	Staphylococcus aureus subsp. aureus str. Newman
Staphylococcus carnosus subsp. carnosus TM300	Staphylococcus epidermidis ATCC 12228
Staphylococcus epidermidis RP62A	Staphylococcus haemolyticus JCSC1435
Staphylococcus lugdunensis HKU09-01	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Streptococcus agalactiae 2603V/R	Streptococcus agalactiae A909
Streptococcus agalactiae NEM316	Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus equi subsp. equi 4047	Streptococcus equi subsp. zooepidemicus H70
Streptococcus equi subsp. zooepidemicus MGCS10565	Streptococcus gallolyticus UCN34
Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6
Streptococcus mutans NN2025	Streptococcus mutans UA159
Streptococcus pneumoniae 70585	Streptococcus pneumoniae ATCC 700669
Streptococcus pneumoniae CGSP14	Streptococcus pneumoniae D39
Streptococcus pneumoniae G54	Streptococcus pneumoniae Hungary19A-6
Streptococcus pneumoniae JJA	Streptococcus pneumoniae P1031
Streptococcus pneumoniae R6	Streptococcus pneumoniae TIGR4
Streptococcus pneumoniae Taiwan19F-14	Streptococcus pyogenes M1 GAS
Streptococcus pyogenes MGAS10270	Streptococcus pyogenes MGAS10394
Streptococcus pyogenes MGAS10750	Streptococcus pyogenes MGAS2096
Streptococcus pyogenes MGAS315	Streptococcus pyogenes MGAS5005
Streptococcus pyogenes MGAS6180	Streptococcus pyogenes MGAS8232
Streptococcus pyogenes MGAS9429	Streptococcus pyogenes NZ131
Streptococcus pyogenes SSI-1	Streptococcus pyogenes str. Manfredo
Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33
Streptococcus suis 98HAH33	Streptococcus suis BM407
Streptococcus suis P1/7	Streptococcus suis SC84
Streptococcus thermophilus CNRZ1066	Streptococcus thermophilus LMD-9
Streptococcus thermophilus LMG 18311	Streptococcus uberis 0140J
Symbiobacterium thermophilum IAM 14863	Syntrophomonas wolfei subsp. wolfei str. Goettingen
Thermoanaerobacter italicus Ab9	Thermoanaerobacter pseudethanolicus ATCC 33223
Thermoanaerobacter sp. X514	Thermoanaerobacter tengcongensis MB4
Ureaplasma parvum serovar 3 str. ATCC 27815	Veillonella parvula DSM 2008
Bacteria; Fusobacteria
Fusobacterium nucleatum subsp. nucleatum ATCC 25586	Leptotrichia buccalis DSM 1135
Sebaldella termitidis ATCC 33386	Streptobacillus moniliformis DSM 12112
Bacteria; Gemmatimonadetes
Gemmatimonas aurantiaca T-27
Bacteria; Nitrospirae
Thermodesulfovibrio yellowstonii DSM 11347
Bacteria; Planctomycetes
Pirellula staleyi DSM 6068	Rhodopirellula baltica SH 1
Bacteria; Proteobacteria
Acetobacter pasteurianus IFO 3283-01	Acetobacter pasteurianus IFO 3283-01-42C
Acetobacter pasteurianus IFO 3283-03	Acetobacter pasteurianus IFO 3283-07
Acetobacter pasteurianus IFO 3283-12	Acetobacter pasteurianus IFO 3283-22
Acetobacter pasteurianus IFO 3283-26	Acetobacter pasteurianus IFO 3283-32
Acidiphilium cryptum JF-5	Acidithiobacillus ferrooxidans ATCC 23270
Acidithiobacillus ferrooxidans ATCC 53993	Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax ebreus TPSY	Acidovorax sp. JS42
Acinetobacter baumannii AB0057	Acinetobacter baumannii AB307-0294
Acinetobacter baumannii ACICU	Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii AYE	Acinetobacter baumannii SDF
Acinetobacter sp. ADP1	Actinobacillus pleuropneumoniae L20
Actinobacillus pleuropneumoniae serovar 3 str. JL03	Actinobacillus pleuropneumoniae serovar 7 str. AP76
Actinobacillus succinogenes 130Z	Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas salmonicida subsp. salmonicida A449	Aggregatibacter aphrophilus NJ8700
Agrobacterium radiobacter K84	Agrobacterium tumefaciens str. C58 (Cereon)
Agrobacterium tumefaciens str. C58 (U. Washington)	Agrobacterium vitis S4
Alcanivorax borkumensis SK2	Aliivibrio salmonicida LFI1238
Alkalilimnicola ehrlichei MLHE-1	Allochromatium vinosum DSM 180
Alteromonas macleodii 'Deep ecotype'	Anaeromyxobacter dehalogenans 2CP-1
Anaeromyxobacter dehalogenans 2CP-C	Anaeromyxobacter sp. Fw109-5
Anaeromyxobacter sp. K	Anaplasma centrale str. Israel
Anaplasma marginale str. Florida	Anaplasma marginale str. St. Maries
Anaplasma phagocytophilum HZ	Arcobacter butzleri RM4018
Aromatoleum aromaticum EbN1	Azoarcus sp. BH72
Azorhizobium caulinodans ORS 571	Azospirillum sp. B510
Azotobacter vinelandii DJ	Bartonella bacilliformis KC583
Bartonella grahamii as4aup	Bartonella henselae
Bartonella quintana str. Toulouse	Bartonella tribocorum CIP 105476
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	Bdellovibrio bacteriovorus HD100
Beijerinckia indica subsp. indica ATCC 9039	Bordetella avium 197N
Bordetella bronchiseptica RB50	Bordetella parapertussis 12822
Bordetella pertussis Tohama I	Bordetella petrii DSM 12804
Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1
Bradyrhizobium sp. ORS278	Brucella abortus S19
Brucella abortus bv. 1 str. 9-941	Brucella canis ATCC 23365
Brucella melitensis ATCC 23457	Brucella melitensis biovar Abortus 2308
Brucella melitensis bv. 1 str. 16M	Brucella microti CCM 4915
Brucella ovis ATCC 25840	Brucella suis 1330
Brucella suis ATCC 23445	Buchnera aphidicola str. 5A (Acyrthosiphon pisum)
Buchnera aphidicola str. APS (Acyrthosiphon pisum)	Buchnera aphidicola str. Bp (Baizongia pistaciae)
Buchnera aphidicola str. Cc (Cinara cedri)	Buchnera aphidicola str. Sg (Schizaphis graminum)
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)	Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6	Burkholderia cenocepacia AU 1054
Burkholderia cenocepacia HI2424	Burkholderia cenocepacia J2315
Burkholderia cenocepacia MC0-3	Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344	Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247	Burkholderia mallei SAVP1
Burkholderia multivorans ATCC 17616 (JGI)	Burkholderia multivorans ATCC 17616 (U.Tohoku)
Burkholderia phymatum STM815	Burkholderia phytofirmans PsJN
Burkholderia pseudomallei 1106a	Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 668	Burkholderia pseudomallei K96243
Burkholderia pseudomallei MSHR346	Burkholderia sp. 383
Burkholderia thailandensis E264	Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400	Campylobacter concisus 13826
Campylobacter curvus 525.92	Campylobacter fetus subsp. fetus 82-40
Campylobacter hominis ATCC BAA-381	Campylobacter jejuni RM1221
Campylobacter jejuni subsp. doylei 269.97	Campylobacter jejuni subsp. jejuni 81-176
Campylobacter jejuni subsp. jejuni 81116	Campylobacter jejuni subsp. jejuni IA3902
Campylobacter jejuni subsp. jejuni NCTC 11168	Campylobacter lari RM2100
Candidatus Accumulibacter phosphatis clade IIA str. UW-1	Candidatus Blochmannia floridanus
Candidatus Blochmannia pennsylvanicus str. BPEN	Candidatus Carsonella ruddii PV
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	Candidatus Hodgkinia cicadicola Dsem
Candidatus Liberibacter asiaticus str. psy62	Candidatus Pelagibacter ubique HTCC1062
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)	Candidatus Vesicomyosocius okutanii HA
Caulobacter crescentus CB15	Caulobacter crescentus NA1000
Caulobacter sp. K31	Cellvibrio japonicus Ueda107
Chromobacterium violaceum ATCC 12472	Chromohalobacter salexigens DSM 3043
Citrobacter koseri ATCC BAA-895	Citrobacter rodentium ICC168
Colwellia psychrerythraea 34H	Comamonas testosteroni CNB-2
Coxiella burnetii CbuG_Q212	Coxiella burnetii CbuK_Q154
Coxiella burnetii Dugway 5J108-111	Coxiella burnetii RSA 331
Coxiella burnetii RSA 493	Cronobacter turicensis z3032
Cupriavidus metallidurans CH34	Cupriavidus taiwanensis
Dechloromonas aromatica RCB	Delftia acidovorans SPH-1
Desulfatibacillum alkenivorans AK-01	Desulfobacterium autotrophicum HRM2
Desulfococcus oleovorans Hxd3	Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028	Desulfotalea psychrophila LSv54
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio desulfuricans subsp. desulfuricans str. G20
Desulfovibrio magneticus RS-1	Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris DP4	Desulfovibrio vulgaris str. 'Miyazaki F'
Desulfovibrio vulgaris str. Hildenborough	Dichelobacter nodosus VCS1703A
Dickeya dadantii Ech586	Dickeya dadantii Ech703
Dickeya zeae Ech1591	Dinoroseobacter shibae DFL 12
Edwardsiella ictaluri 93-146	Ehrlichia canis str. Jake
Ehrlichia chaffeensis str. Arkansas	Ehrlichia ruminantium str. Gardel
Ehrlichia ruminantium str. Welgevonden (CIRAD)	Ehrlichia ruminantium str. Welgevonden (U.Pretoria)
Enterobacter sakazakii ATCC BAA-894	Enterobacter sp. 638
Erwinia pyrifoliae DSM 12163	Erwinia pyrifoliae Ep1/96
Erwinia tasmaniensis Et1/99	Erythrobacter litoralis HTCC2594
Escherichia coli 042	Escherichia coli 536
Escherichia coli 55989	Escherichia coli APEC O1
Escherichia coli ATCC 8739	Escherichia coli B str. REL606
Escherichia coli BL21(DE3)(BOKU)	Escherichia coli BL21(DE3)(Bioenergy Research Center)
Escherichia coli BL21(DE3)(JGI)	Escherichia coli BW2952
Escherichia coli CFT073	Escherichia coli DH1
Escherichia coli E24377A	Escherichia coli ED1a
Escherichia coli HS	Escherichia coli IAI1
Escherichia coli IAI39	Escherichia coli O127:H6 str. E2348/69
Escherichia coli O157:H7 EDL933	Escherichia coli O157:H7 str. EC4115
Escherichia coli O157:H7 str. Sakai	Escherichia coli O157:H7 str. TW14359
Escherichia coli O55:H7 str. CB9615	Escherichia coli S88
Escherichia coli SE11	Escherichia coli SE15
Escherichia coli SMS-3-5	Escherichia coli UMN026
Escherichia coli UTI89	Escherichia coli str. K-12 substr. DH10B
Escherichia coli str. K-12 substr. MG1655	Escherichia coli str. K-12 substr. W3110
Escherichia fergusonii ATCC 35469	Francisella novicida U112
Francisella philomiragia subsp. philomiragia ATCC 25017	Francisella tularensis subsp. holarctica FTNF002-00
Francisella tularensis subsp. holarctica LVS	Francisella tularensis subsp. holarctica OSU18
Francisella tularensis subsp. mediasiatica FSC147	Francisella tularensis subsp. tularensis FSC198
Francisella tularensis subsp. tularensis NE061598	Francisella tularensis subsp. tularensis SCHU S4
Francisella tularensis subsp. tularensis WY96-3418	Geobacter bemidjiensis Bem
Geobacter lovleyi SZ	Geobacter metallireducens GS-15
Geobacter sp. FRC-32	Geobacter sp. M21
Geobacter sulfurreducens PCA	Geobacter uraniireducens Rf4
Gluconacetobacter diazotrophicus PAl 5 (JGI)	Gluconacetobacter diazotrophicus PAl 5 (U.Federal do Rio de Janeiro)
Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1
Haemophilus ducreyi 35000HP	Haemophilus influenzae 86-028NP
Haemophilus influenzae PittEE	Haemophilus influenzae PittGG
Haemophilus influenzae Rd KW20	Haemophilus parasuis SH0165
Haemophilus somnus 129PT	Haemophilus somnus 2336
Hahella chejuensis KCTC 2396	Haliangium ochraceum DSM 14365
Halorhodospira halophila SL1	Halothiobacillus neapolitanus c2
Helicobacter acinonychis str. Sheeba	Helicobacter hepaticus ATCC 51449
Helicobacter mustelae 12198	Helicobacter pylori 26695
Helicobacter pylori 51	Helicobacter pylori 52
Helicobacter pylori B38	Helicobacter pylori G27
Helicobacter pylori HPAG1	Helicobacter pylori J99
Helicobacter pylori P12	Helicobacter pylori Shi470
Herminiimonas arsenicoxydans	Hirschia baltica ATCC 49814
Hyphomonas neptunium ATCC 15444	Idiomarina loihiensis L2TR
Jannaschia sp. CCS1	Janthinobacterium sp. Marseille
Kangiella koreensis DSM 16069	Klebsiella pneumoniae 342
Klebsiella pneumoniae NTUH-K2044	Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Klebsiella variicola At-22	Laribacter hongkongensis HLHK9
Lawsonia intracellularis PHE/MN1-00	Legionella longbeachae NSW150
Legionella pneumophila str. Corby	Legionella pneumophila str. Lens
Legionella pneumophila str. Paris	Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Leptothrix cholodnii SP-6	Magnetococcus sp. MC-1
Magnetospirillum magneticum AMB-1	Mannheimia succiniciproducens MBEL55E
Maricaulis maris MCS10	Marinobacter aquaeolei VT8
Marinomonas sp. MWYL1	Mesorhizobium loti MAFF303099
Mesorhizobium sp. BNC1	Methylibium petroleiphilum PM1
Methylobacillus flagellatus KT	Methylobacterium chloromethanicum CM4
Methylobacterium extorquens AM1	Methylobacterium extorquens DM4
Methylobacterium extorquens PA1	Methylobacterium nodulans ORS 2060
Methylobacterium populi BJ001	Methylobacterium radiotolerans JCM 2831
Methylobacterium sp. 4-46	Methylocella silvestris BL2
Methylococcus capsulatus str. Bath	Methylotenera mobilis JLW8
Methylovorus sp. SIP3-4	Myxococcus xanthus DK 1622
Nautilia profundicola AmH	Neisseria gonorrhoeae FA 1090
Neisseria gonorrhoeae NCCP11945	Neisseria meningitidis 053442
Neisseria meningitidis 8013	Neisseria meningitidis FAM18
Neisseria meningitidis MC58	Neisseria meningitidis Z2491
Neisseria meningitidis alpha14	Neorickettsia risticii str. Illinois
Neorickettsia sennetsu str. Miyayama	Nitratiruptor sp. SB155-2
Nitrobacter hamburgensis X14	Nitrobacter winogradskyi Nb-255
Nitrosococcus oceani ATCC 19707	Nitrosomonas europaea ATCC 19718
Nitrosomonas eutropha C91	Nitrosospira multiformis ATCC 25196
Novosphingobium aromaticivorans DSM 12444	Ochrobactrum anthropi ATCC 49188
Oligotropha carboxidovorans OM5	Orientia tsutsugamushi str. Boryong
Orientia tsutsugamushi str. Ikeda	Paracoccus denitrificans PD1222
Parvibaculum lavamentivorans DS-1	Pasteurella multocida subsp. multocida str. Pm70
Pectobacterium atrosepticum SCRI1043	Pectobacterium carotovorum subsp. carotovorum PC1
Pectobacterium wasabiae WPP163	Pelobacter carbinolicus DSM 2380
Pelobacter propionicus DSM 2379	Phenylobacterium zucineum HLK1
Photobacterium profundum ss9	Photorhabdus asymbiotica
Photorhabdus luminescens subsp. laumondii TTO1	Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666	Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
Polynucleobacter necessarius subsp. necessarius STIR1	Proteus mirabilis HI4320
Pseudoalteromonas atlantica T6c	Pseudoalteromonas haloplanktis TAC125
Pseudomonas aeruginosa LESB58	Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa PAO1	Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens Pf0-1	Pseudomonas fluorescens SBW25
Pseudomonas mendocina ymp	Pseudomonas putida F1
Pseudomonas putida GB-1	Pseudomonas putida KT2440
Pseudomonas putida W619	Pseudomonas stutzeri A1501
Pseudomonas syringae pv. phaseolicola 1448A	Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. tomato str. DC3000	Psychrobacter arcticus 273-4
Psychrobacter cryohalolentis K5	Psychrobacter sp. PRwf-1
Psychromonas ingrahamii 37	Ralstonia eutropha H16
Ralstonia eutropha JMP134	Ralstonia pickettii 12D
Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000
Rhizobium etli CFN 42	Rhizobium etli CIAT 652
Rhizobium leguminosarum bv. trifolii WSM1325	Rhizobium leguminosarum bv. trifolii WSM2304
Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234
Rhodobacter sphaeroides 2.4.1	Rhodobacter sphaeroides ATCC 17025
Rhodobacter sphaeroides ATCC 17029	Rhodobacter sphaeroides KD131
Rhodoferax ferrireducens T118	Rhodopseudomonas palustris BisA53
Rhodopseudomonas palustris BisB18	Rhodopseudomonas palustris BisB5
Rhodopseudomonas palustris CGA009	Rhodopseudomonas palustris HaA2
Rhodospirillum centenum SW	Rhodospirillum rubrum ATCC 11170
Rickettsia africae ESF-5	Rickettsia akari str. Hartford
Rickettsia bellii OSU 85-389	Rickettsia bellii RML369-C
Rickettsia canadensis str. McKiel	Rickettsia conorii str. Malish 7
Rickettsia felis URRWXCal2	Rickettsia massiliae MTU5
Rickettsia peacockii str. Rustic	Rickettsia prowazekii str. Madrid E
Rickettsia rickettsii str. 'Sheila Smith'	Rickettsia rickettsii str. Iowa
Rickettsia typhi str. Wilmington	Roseobacter denitrificans OCh 114
Ruegeria pomeroyi DSS-3	Saccharophagus degradans 2-40
Salmonella enterica subsp. arizonae serovar 62:z4,z23:--	Salmonella enterica subsp. enterica serovar Agona str. SL483
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	Salmonella enterica subsp. enterica serovar Newport str. SL254
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Salmonella enterica subsp. enterica serovar Typhi str. Ty2	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Serratia proteamaculans 568	Shewanella amazonensis SB2B
Shewanella baltica OS155	Shewanella baltica OS185
Shewanella baltica OS195	Shewanella baltica OS223
Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4
Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3	Shewanella putrefaciens CN-32
Shewanella sediminis HAW-EB3	Shewanella sp. ANA-3
Shewanella sp. MR-4	Shewanella sp. MR-7
Shewanella sp. W3-18-1	Shewanella woodyi ATCC 51908
Shigella boydii CDC 3083-94	Shigella boydii Sb227
Shigella dysenteriae Sd197	Shigella flexneri 2002017
Shigella flexneri 2a str. 2457T	Shigella flexneri 2a str. 301
Shigella flexneri 5 str. 8401	Shigella sonnei Ss046
Silicibacter sp. TM1040	Sinorhizobium medicae WSM419
Sinorhizobium meliloti 1021	Sodalis glossinidius str. 'morsitans'
Sorangium cellulosum 'So ce 56'	Sphingomonas wittichii RW1
Sphingopyxis alaskensis RB2256	Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3	Sulfurimonas denitrificans DSM 1251
Sulfurospirillum deleyianum DSM 6946	Sulfurovum sp. NBC37-1
Syntrophobacter fumaroxidans MPOB	Syntrophus aciditrophicus SB
Thioalkalivibrio sp. HL-EbGR7	Thioalkalivibrio sp. K90mix
Thiobacillus denitrificans ATCC 25259	Thiomicrospira crunogena XCL-2
Tolumonas auensis DSM 9187	Variovorax paradoxus S110
Verminephrobacter eiseniae EF01-2	Vibrio cholerae M66-2
Vibrio cholerae MJ-1236	Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio cholerae O395 (J.Craig Venter)	Vibrio cholerae O395(U.Nankai)
Vibrio fischeri ES114	Vibrio fischeri MJ11
Vibrio harveyi ATCC BAA-1116	Vibrio parahaemolyticus RIMD 2210633
Vibrio sp. Ex25	Vibrio splendidus LGP32
Vibrio vulnificus CMCP6	Vibrio vulnificus YJ016
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	Wolbachia endosymbiont of Culex quinquefasciatus Pel
Wolbachia endosymbiont of Drosophila melanogaster	Wolbachia endosymbiont strain TRS of Brugia malayi
Wolbachia sp. wRi	Wolinella succinogenes DSM 1740
Xanthobacter autotrophicus Py2	Xanthomonas albilineans
Xanthomonas axonopodis pv. citri str. 306	Xanthomonas campestris pv. campestris str. 8004
Xanthomonas campestris pv. campestris str. ATCC 33913	Xanthomonas campestris pv. campestris str. B100
Xanthomonas euvesicatoria	Xanthomonas oryzae pv. oryzae KACC10331
Xanthomonas oryzae pv. oryzae MAFF 311018	Xanthomonas oryzae pv. oryzae PXO99A
Xenorhabdus bovienii SS-2004	Xenorhabdus nematophila ATCC 19061
Xylella fastidiosa 9a5c	Xylella fastidiosa M12
Xylella fastidiosa M23	Xylella fastidiosa Temecula1
Yersinia enterocolitica subsp. enterocolitica 8081	Yersinia pestis Angola
Yersinia pestis Antiqua	Yersinia pestis CO92
Yersinia pestis KIM	Yersinia pestis Nepal516
Yersinia pestis Pestoides F	Yersinia pestis biovar Microtus str. 91001
Yersinia pseudotuberculosis IP 31758	Yersinia pseudotuberculosis IP 32953
Yersinia pseudotuberculosis PB1/+	Yersinia pseudotuberculosis YPIII
Zymomonas mobilis subsp. mobilis NCIMB 11163	Zymomonas mobilis subsp. mobilis ZM4
uncultured alpha proteobacterium 01-003886
Bacteria; Spirochaetes
Borrelia afzelii PKo	Borrelia burgdorferi B31
Borrelia burgdorferi ZS7	Borrelia duttonii Ly
Borrelia garinii PBi	Borrelia hermsii DAH
Borrelia recurrentis A1	Borrelia turicatae 91E135
Brachyspira hyodysenteriae WA1	Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'	Leptospira borgpetersenii serovar Hardjo-bovis JB197
Leptospira borgpetersenii serovar Hardjo-bovis L550	Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Leptospira interrogans serovar Lai str. 56601	Treponema denticola ATCC 35405
Treponema pallidum subsp. pallidum str. Chicago	Treponema pallidum subsp. pallidum str. Nichols
Bacteria; Synergistetes
Thermanaerovibrio acidaminovorans DSM 6589
Bacteria; Tenericutes
Candidatus Phytoplasma mali	Mycoplasma agalactiae PG2
Mycoplasma arthritidis 158L3-1	Mycoplasma conjunctivae HRC/581T
Mycoplasma fermentans PG18	Mycoplasma gallisepticum str. F
Mycoplasma gallisepticum str. R(high)	Mycoplasma gallisepticum str. R(low)
Mycoplasma genitalium G37	Mycoplasma mycoides subsp. mycoides SC str. PG1
Mycoplasma penetrans HF-2	Mycoplasma pneumoniae M129
Onion yellows phytoplasma OY-M	Ureaplasma parvum serovar 3 str. ATCC 700970
Ureaplasma urealyticum serovar 10 str. ATCC 33699
Bacteria; Thermobaculum.
Thermobaculum terrenum ATCC BAA-798
Bacteria; Thermotogae
Fervidobacterium nodosum Rt17-B1	Kosmotoga olearia TBF 19.5.1
Petrotoga mobilis SJ95	Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429	Thermotoga lettingae TMO
Thermotoga maritima MSB8	Thermotoga naphthophila RKU-10
Thermotoga neapolitana DSM 4359	Thermotoga petrophila RKU-1
Thermotoga sp. RQ2
Bacteria; Verrucomicrobia
Akkermansia muciniphila ATCC BAA-835	Methylacidiphilum infernorum V4
Opitutus terrae PB90-1
Bacteria; candidate division TG1
uncultured Termite group 1 bacterium phylotype Rs-D17
Eukaryota; Alveolata
Plasmodium falciparum 3D7
Eukaryota; Cryptophyta
Guillardia theta
Eukaryota; Euglenozoa
Leishmania major strain Friedlin
Eukaryota; Fungi
Schizosaccharomyces pombe 972h-
Eukaryota; Viridiplantae
Arabidopsis thaliana
Saccharomycetes; Saccharomycetales
Saccharomyces cerevisiae